5j96

X-ray diffraction
3.41Å resolution

Crystal structure of Slow Bee Paralysis Virus at 3.4A resolution

Released:

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero 180-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-108293 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
VP1 Chain: A
Molecule details ›
Chain: A
Length: 266 amino acids
Theoretical weight: 30.31 KDa
Source organism: Slow bee paralysis virus
Expression system: Apis mellifera
UniProt:
  • Canonical: A7LM73 (Residues: 889-1154; Coverage: 9%)
Sequence domains: CRPV capsid protein like
VP2 Chain: B
Molecule details ›
Chain: B
Length: 261 amino acids
Theoretical weight: 29.82 KDa
Source organism: Slow bee paralysis virus
Expression system: Apis mellifera
UniProt:
  • Canonical: A7LM73 (Residues: 177-437; Coverage: 9%)
Sequence domains: picornavirus capsid protein
Structure domains: Jelly Rolls
Genome polyprotein Chain: C
Molecule details ›
Chain: C
Length: 430 amino acids
Theoretical weight: 47.62 KDa
Source organism: Slow bee paralysis virus
Expression system: Apis mellifera
UniProt:
  • Canonical: A7LM73 (Residues: 459-888; Coverage: 15%)
Sequence domains: picornavirus capsid protein

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SLS BEAMLINE X10SA
Spacegroup: I23
Unit cell:
a: 360.661Å b: 360.661Å c: 360.661Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.339 0.339 0.339
Expression system: Apis mellifera