Chemical Components in the PDB

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DRZ : Summary

Code

DRZ

One-letter code

N

Molecule name

3',4'-DIHYDROXY-PENTANAL-5'-PHOSPHATE

Systematic names

ProgramVersionName
ACDLabs 10.04 2-deoxy-5-O-phosphono-D-erythro-pentose
OpenEye OEToolkits 1.5.0 [(2R,3S)-2,3-dihydroxy-5-oxo-pentyl] dihydrogen phosphate

Formula

C5 H11 O7 P

Formal charge

0

Molecular weight

214.11 Da

SMILES

TypeProgramVersionDescriptor
SMILES ACDLabs 10.04 O=P(O)(O)OCC(O)C(O)CC=O
SMILES CACTVS 3.341 O[CH](CO[P](O)(O)=O)[CH](O)CC=O
SMILES OpenEye OEToolkits 1.5.0 C(C=O)C(C(COP(=O)(O)O)O)O
Canonical SMILES CACTVS 3.341 O[C@H](CO[P](O)(O)=O)[C@@H](O)CC=O
Canonical SMILES OpenEye OEToolkits 1.5.0 C(C=O)[C@@H]([C@@H](COP(=O)(O)O)O)O

IUPAC InChI

InChI=1S/C5H11O7P/c6-2-1-4(7)5(8)3-12-13(9,10)11/h2,4-5,7-8H,1,3H2,(H2,9,10,11)/t4-,5+/m0/s1

IUPAC InChI key

ALQNUOMIEBHXQG-CRCLSJGQSA-N
DRZ

wwPDB Information

Atom count

24 (13 without Hydrogen)

Polymer type

Deoxy ribonucleotide

Type description

DNA LINKING

Type code

ATOMN

Is modified

Yes

Standard parent

Not Assigned

Defined at

2002-07-18

Last modified at

2011-06-04

Status

Released

Obsoleted

Not Assigned