Chemical Components in the PDB

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LYZ : Summary

Code

LYZ

One-letter code

K

Molecule name

5-HYDROXYLYSINE

Systematic names

ProgramVersionName
ACDLabs 10.04 (5R)-5-hydroxy-L-lysine
OpenEye OEToolkits 1.5.0 (2S,5R)-2,6-diamino-5-hydroxy-hexanoic acid

Formula

C6 H14 N2 O3

Formal charge

0

Molecular weight

162.187 Da

SMILES

TypeProgramVersionDescriptor
SMILES ACDLabs 10.04 O=C(O)C(N)CCC(O)CN
SMILES CACTVS 3.341 NC[CH](O)CC[CH](N)C(O)=O
SMILES OpenEye OEToolkits 1.5.0 C(CC(C(=O)O)N)C(CN)O
Canonical SMILES CACTVS 3.341 NC[C@H](O)CC[C@H](N)C(O)=O
Canonical SMILES OpenEye OEToolkits 1.5.0 C(C[C@@H](C(=O)O)N)[C@H](CN)O

IUPAC InChI

InChI=1S/C6H14N2O3/c7-3-4(9)1-2-5(8)6(10)11/h4-5,9H,1-3,7-8H2,(H,10,11)/t4-,5+/m1/s1

IUPAC InChI key

YSMODUONRAFBET-UHNVWZDZSA-N
LYZ

wwPDB Information

Atom count

25 (11 without Hydrogen)

Polymer type

Amino Acid

Type description

L-PEPTIDE LINKING

Type code

ATOMP

Is modified

Yes

Standard parent

LYS

Defined at

1999-07-08

Last modified at

2023-11-03

Status

Released

Obsoleted

Not Assigned