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T3Q : Summary
Code 
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T3Q
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One-letter code
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X
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Molecule name
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[(3R,4S,5S,6R)-4-amino-3,5-dihydroxy-6-methyloxan-2-yl][hydroxy-[[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy]phosphoryl] hydrogen phosphate
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Synonyms
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thymidine-5'-diphosphate-alpha-D-3,6-dideoxy-3-aminoglucose
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Systematic names
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Formula
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C16 H27 N3 O14 P2
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Formal charge
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0
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Molecular weight
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547.345 Da
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SMILES
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| Type | Program | Version | Descriptor |
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SMILES
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ACDLabs |
10.04 |
O=P(OC1OC(C(O)C(N)C1O)C)(O)OP(=O)(O)OCC3OC(N2C=C(C(=O)NC2=O)C)CC3O |
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SMILES
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CACTVS |
3.341 |
C[CH]1O[CH](O[P](O)(=O)O[P](O)(=O)OC[CH]2O[CH](C[CH]2O)N3C=C(C)C(=O)NC3=O)[CH](O)[CH](N)[CH]1O |
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SMILES
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OpenEye OEToolkits |
1.5.0 |
CC1C(C(C(C(O1)OP(=O)(O)OP(=O)(O)OCC2C(CC(O2)N3C=C(C(=O)NC3=O)C)O)O)N)O |
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Canonical SMILES
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CACTVS |
3.341 |
C[C@H]1O[C@H](O[P@@](O)(=O)O[P@](O)(=O)OC[C@H]2O[C@H](C[C@@H]2O)N3C=C(C)C(=O)NC3=O)[C@H](O)[C@@H](N)[C@@H]1O |
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Canonical SMILES
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OpenEye OEToolkits |
1.5.0 |
C[C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O[P@](=O)(O)O[P@@](=O)(O)OC[C@@H]2[C@H](C[C@@H](O2)N3C=C(C(=O)NC3=O)C)O)O)N)O |
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IUPAC InChI | InChI=1S/C16H27N3O14P2/c1-6-4-19(16(24)18-14(6)23)10-3-8(20)9(31-10)5-29-34(25,26)33-35(27,28)32-15-13(22)11(17)12(21)7(2)30-15/h4,7-13,15,20-22H,3,5,17H2,1-2H3,(H,25,26)(H,27,28)(H,18,23,24)/t7-,8+,9-,10-,11+,12-,13-,15-/m1/s1 |
IUPAC InChI key | KVYJLJOGNUNRJK-HALQBZCBSA-N |
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wwPDB Information |
Atom count
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62 (35 without Hydrogen)
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Polymer type
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Bound ligand
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Type description
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NON-POLYMER
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Type code
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HETAIN
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Is modified
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No
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Standard parent
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Not Assigned
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Defined at
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2009-02-02
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Last modified at
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2021-03-13
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Status
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Released
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Obsoleted
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Not Assigned
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Protein Data Bank 
