Structure of the recycling U5 snRNP bound to chaperones CD2BP2 and TSSC4 (State 2, Map 2)
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8q7q
Q-score: 0.371
Riabov Bassat D, Visanpattanasin S, Vorlander MK, Fin L, Phillips AW, Plaschka C
Nat Struct Mol Biol (2024) [ Pubmed: 38467876 DOI: doi:10.1038/s41594-024-01243-4 ]
- Small nuclear ribonucleoprotein f (9 kDa, Protein from Homo sapiens)
- Structure of the recycling u5 snrnp bound to chaperones cd2bp2 and tssc4 (state , map 2) (1 MDa, Complex from Homo sapiens)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Protein tssc4 (34 kDa, Protein from Homo sapiens)
- Small nuclear ribonucleoprotein sm d1 (13 kDa, Protein from Homo sapiens)
- Pre-mrna-processing-splicing factor 8 (273 kDa, Protein from Homo sapiens)
- Cd2 antigen cytoplasmic tail-binding protein 2 (37 kDa, Protein from Homo sapiens)
- Small nuclear ribonucleoprotein-associated proteins b and b' (24 kDa, Protein from Homo sapiens)
- Small nuclear ribonucleoprotein sm d2 (13 kDa, Protein from Homo sapiens)
- Small nuclear ribonucleoprotein sm d3 (13 kDa, Protein from Homo sapiens)
- U5 small nuclear ribonucleoprotein 200 kda helicase (244 kDa, Protein from Homo sapiens)
- Pre-mrna-processing factor 6 (107 kDa, Protein from Homo sapiens)
- Small nuclear ribonucleoprotein g (8 kDa, Protein from Homo sapiens)
- U5 small nuclear ribonucleoprotein 40 kda protein (39 kDa, Protein from Homo sapiens)
- 116 kda u5 small nuclear ribonucleoprotein component (109 kDa, Protein from Homo sapiens)
- Small nuclear ribonucleoprotein e (10 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- U5 snrna (37 kDa, RNA from Homo sapiens)
Structure of the recycling U5 snRNP bound to chaperones CD2BP2 and TSSC4 (State 1, Map 1)
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 8q7v
Q-score: 0.252
Riabov Bassat D, Visanpattanasin S, Vorlander MK, Fin L, Phillips AW, Plaschka C
Nat Struct Mol Biol (2024) [ Pubmed: 38467876 DOI: doi:10.1038/s41594-024-01243-4 ]
- Small nuclear ribonucleoprotein f (9 kDa, Protein from Homo sapiens)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Protein tssc4 (34 kDa, Protein from Homo sapiens)
- Small nuclear ribonucleoprotein sm d1 (13 kDa, Protein from Homo sapiens)
- Pre-mrna-processing-splicing factor 8 (273 kDa, Protein from Homo sapiens)
- Cd2 antigen cytoplasmic tail-binding protein 2 (37 kDa, Protein from Homo sapiens)
- Small nuclear ribonucleoprotein-associated proteins b and b' (24 kDa, Protein from Homo sapiens)
- Small nuclear ribonucleoprotein sm d2 (13 kDa, Protein from Homo sapiens)
- Small nuclear ribonucleoprotein sm d3 (13 kDa, Protein from Homo sapiens)
- U5 small nuclear ribonucleoprotein 200 kda helicase (244 kDa, Protein from Homo sapiens)
- Pre-mrna-processing factor 6 (107 kDa, Protein from Homo sapiens)
- Small nuclear ribonucleoprotein g (8 kDa, Protein from Homo sapiens)
- U5 small nuclear ribonucleoprotein 40 kda protein (39 kDa, Protein from Homo sapiens)
- 116 kda u5 small nuclear ribonucleoprotein component (109 kDa, Protein from Homo sapiens)
- Small nuclear ribonucleoprotein e (10 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Structure of the recycling u5 snrnp bound to chaperones cd2bp2 and tssc4 (state 1, map 1) (1 MDa, Complex from Homo sapiens)
- U5 snrna (37 kDa, RNA from Homo sapiens)
Structure of the recycling U5 snRNP bound to chaperone CD2BP2 (State 3, Map 3)
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 8q7w
Q-score: 0.226
Riabov Bassat D, Visanpattanasin S, Vorlander MK, Fin L, Phillips AW, Plaschka C
Nat Struct Mol Biol (2024) [ Pubmed: 38467876 DOI: doi:10.1038/s41594-024-01243-4 ]
- Small nuclear ribonucleoprotein f (9 kDa, Protein from Homo sapiens)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Small nuclear ribonucleoprotein sm d1 (13 kDa, Protein from Homo sapiens)
- Pre-mrna-processing-splicing factor 8 (273 kDa, Protein from Homo sapiens)
- Cd2 antigen cytoplasmic tail-binding protein 2 (37 kDa, Protein from Homo sapiens)
- Small nuclear ribonucleoprotein-associated proteins b and b' (24 kDa, Protein from Homo sapiens)
- Small nuclear ribonucleoprotein sm d2 (13 kDa, Protein from Homo sapiens)
- Small nuclear ribonucleoprotein sm d3 (13 kDa, Protein from Homo sapiens)
- U5 small nuclear ribonucleoprotein 200 kda helicase (244 kDa, Protein from Homo sapiens)
- Pre-mrna-processing factor 6 (107 kDa, Protein from Homo sapiens)
- Small nuclear ribonucleoprotein g (8 kDa, Protein from Homo sapiens)
- U5 small nuclear ribonucleoprotein 40 kda protein (39 kDa, Protein from Homo sapiens)
- 116 kda u5 small nuclear ribonucleoprotein component (109 kDa, Protein from Homo sapiens)
- Small nuclear ribonucleoprotein e (10 kDa, Protein from Homo sapiens)
- Structure of the recycling u5 snrnp bound to chaperone cd2bp2 (state 3, map 3) (1 MDa, Complex from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Probable atp-dependent rna helicase ddx23 (95 kDa, Protein from Homo sapiens)
- U5 snrna (37 kDa, RNA from Homo sapiens)
Structure of the recycling U5 snRNP bound to chaperone CD2BP2 (State 4, Map 4)
Resolution: 4.6 Å
EM Method: Single-particle
Fitted PDBs: 8q7x
Q-score: 0.148
Riabov Bassat D, Visanpattanasin S, Vorlander MK, Fin L, Phillips AW, Plaschka C
Nat Struct Mol Biol (2024) [ Pubmed: 38467876 DOI: doi:10.1038/s41594-024-01243-4 ]
- Small nuclear ribonucleoprotein f (9 kDa, Protein from Homo sapiens)
- Structure of the recycling u5 snrnp bound to chaperone cd2bp2 (state 4, map 4) (1 MDa, Complex from Homo sapiens)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Small nuclear ribonucleoprotein sm d1 (13 kDa, Protein from Homo sapiens)
- Pre-mrna-processing-splicing factor 8 (273 kDa, Protein from Homo sapiens)
- Cd2 antigen cytoplasmic tail-binding protein 2 (37 kDa, Protein from Homo sapiens)
- Small nuclear ribonucleoprotein-associated proteins b and b' (24 kDa, Protein from Homo sapiens)
- Small nuclear ribonucleoprotein sm d2 (13 kDa, Protein from Homo sapiens)
- Small nuclear ribonucleoprotein sm d3 (13 kDa, Protein from Homo sapiens)
- U5 small nuclear ribonucleoprotein 200 kda helicase (244 kDa, Protein from Homo sapiens)
- Pre-mrna-processing factor 6 (107 kDa, Protein from Homo sapiens)
- Small nuclear ribonucleoprotein g (8 kDa, Protein from Homo sapiens)
- U5 small nuclear ribonucleoprotein 40 kda protein (39 kDa, Protein from Homo sapiens)
- 116 kda u5 small nuclear ribonucleoprotein component (109 kDa, Protein from Homo sapiens)
- Small nuclear ribonucleoprotein e (10 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Probable atp-dependent rna helicase ddx23 (95 kDa, Protein from Homo sapiens)
- U5 snrna (37 kDa, RNA from Homo sapiens)
Structure of the recycling U5 snRNP bound to chaperone CD2BP2 and TSSC4 (Map 5)
Riabov Bassat D, Visanpattanasin S, Vorlander MK, Fin L, Phillips AW, Plaschka C
Nat Struct Mol Biol (2024) [ Pubmed: 38467876 DOI: doi:10.1038/s41594-024-01243-4 ]
Structure of the recycling U5 snRNP bound to chaperone CD2BP2 and TSSC4 (Map 6)
Riabov Bassat D, Visanpattanasin S, Vorlander MK, Fin L, Phillips AW, Plaschka C
Nat Struct Mol Biol (2024) [ Pubmed: 38467876 DOI: doi:10.1038/s41594-024-01243-4 ]
Focused refinement map of BRR2 region of the human minor pre-B complex
Bai R, Yuan M, Zhang P, Luo T, Shi Y, Wan R
Science (2024) 383 pp. 1245-1252 [ Pubmed: 38484052 DOI: doi:10.1126/science.adn7272 ]
- Human minor pre-b complex (1 MDa, Complex from Homo sapiens)
Focused refinement map of U5 snRNP of the human minor pre-B complex
Bai R, Yuan M, Zhang P, Luo T, Shi Y, Wan R
Science (2024) 383 pp. 1245-1252 [ Pubmed: 38484052 DOI: doi:10.1126/science.adn7272 ]
- Human minor pre-b complex (1 MDa, Complex from Homo sapiens)
Focused refinement map of U5 Sm ring region of the human minor pre-B complex
Bai R, Yuan M, Zhang P, Luo T, Shi Y, Wan R
Science (2024) 383 pp. 1245-1252 [ Pubmed: 38484052 DOI: doi:10.1126/science.adn7272 ]
- Human minor pre-b complex (1 MDa, Complex from Homo sapiens)
Focused refinement map for U4atac/U6atac region of the human minor pre-B complex
Bai R, Yuan M, Zhang P, Luo T, Shi Y, Wan R
Science (2024) 383 pp. 1245-1252 [ Pubmed: 38484052 DOI: doi:10.1126/science.adn7272 ]
- Human minor pre-b complex (1 MDa, Complex from Homo sapiens)