Chimeric flavivirus between Binjari virus and West Nile (Kunjin) virus
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7kv9
Q-score: 0.588
Hardy JM, Newton ND, Modhiran N, Scott CAP, Venugopal H, Vet LJ, Young PR, Hall RA, Hobson-Peters J, Coulibaly F, Watterson D
Nat Commun (2021) 12 pp. 3266-3266 [ Pubmed: 34075032 DOI: doi:10.1038/s41467-021-22773-1 ]
- Envelope protein e (53 kDa, Protein from Kunjin virus)
- M and e from west nile virus isolate nsw2011 form a complex that assembles into anti-parallel dimers, (m-e)2, in the t=3 icosahedral particle. (Complex from Kunjin virus)
- Binjari virus (11 MDa, Virus from Binjari virus)
- Matrix protein m (8 kDa, Protein from Kunjin virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Structure of West Nile virus (Kunjin)
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7kva
Q-score: 0.555
Hardy JM, Newton ND, Modhiran N, Scott CAP, Venugopal H, Vet LJ, Young PR, Hall RA, Hobson-Peters J, Coulibaly F, Watterson D
Nat Commun (2021) 12 pp. 3266-3266 [ Pubmed: 34075032 DOI: doi:10.1038/s41467-021-22773-1 ]
- Envelope protein e (53 kDa, Protein from Kunjin virus)
- Kunjin virus (22 MDa, Virus from Kunjin virus)
- Matrix protein m (8 kDa, Protein from Kunjin virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Icosahedral cryo-EM structure of immature Kunjin virus
Therkelsen MD, Klose T, Vago F, Jiang W, Rossmann MG, Kuhn RJ
PNAS (2018) 115 pp. 11608-11612 [ Pubmed: 30348794 DOI: doi:10.1073/pnas.1809304115 ]
Asymmetric cryo-EM structure of immature Kunjin virus
Therkelsen MD, Klose T, Vago F, Jiang W, Rossmann MG, Kuhn RJ
PNAS (2018) 115 pp. 11608-11612 [ Pubmed: 30348794 DOI: doi:10.1073/pnas.1809304115 ]
Icosahedral cryo-EM structure of mature Kunjin virus
Therkelsen MD, Klose T, Vago F, Jiang W, Rossmann MG, Kuhn RJ
PNAS (2018) 115 pp. 11608-11612 [ Pubmed: 30348794 DOI: doi:10.1073/pnas.1809304115 ]
Asymmetric cryo-EM structure of mature Kunjin virus
Therkelsen MD, Klose T, Vago F, Jiang W, Rossmann MG, Kuhn RJ
PNAS (2018) 115 pp. 11608-11612 [ Pubmed: 30348794 DOI: doi:10.1073/pnas.1809304115 ]
cryo-EM reconstruction of West Nile virus
Resolution: 10.3 Å
EM Method: Single-particle
Fitted PDBs: 3j0b
Q-score: 0.086
Zhang W, Kaufmann B, Chipman PR, Kuhn RJ, Rossmann MG
J Struct Biol (2013) 183 pp. 86-94 [ DOI: doi:10.1016/j.jsb.2013.04.005 Pubmed: 23602814 ]
West Nile Virus in complex with Fab fragments of the neutralizing monoclonal antibody CR4354
Resolution: 13.7 Å
EM Method: Single-particle
Fitted PDBs: 3iyw
Q-score: 0.071
Kaufmann B, Vogt MR, Goudsmit J, Holdaway HA, Aksyuk AA, Chipman PR, Kuhn RJ, Diamond MS, Rossmann MG
PNAS (2010) 107 pp. 18950-18955 [ DOI: doi:10.1073/pnas.1011036107 Pubmed: 20956322 ]
Kaufmann B, Chipman PR, Holdaway HA, Johnson S, Fremont DH, Kuhn RJ, Diamond MS, Rossmann MG
PLoS Pathog (2009) 5 pp. e1000672-e1000672 [ Pubmed: 19956725 DOI: doi:10.1371/journal.ppat.1000672 ]
Immature West Nile Virus (WNV) in complex with Fab fragments of the anti-fusion loop antibody E53
Resolution: 15.0 Å
EM Method: Single-particle
Fitted PDBs: 3ixx
Q-score: 0.033
Cherrier MV, Kaufmann B, Nybakken GE, Lok SM, Warren JT, Chen BR, Nelson CA, Kostyuchenko VA, Holdaway HA, Chipman PR, Kuhn RJ, Diamond MS, Rossmann MG, Fremont DH
EMBO J (2009) 28 pp. 3269-3276 [ Pubmed: 19713934 DOI: doi:10.1038/emboj.2009.245 ]
- Immature west nile virus complexed with e53 fab (24 MDa, Sample)
- Immature west nile virus (18 MDa, Virus)